2009  source ~/.bashrc
 2010  # testing
 2011  # This is working
 2012  # I promise
 2013  pwd
 2014  git init
 2015  ls
 2016  ls -a
 2017  git status
 2018  nano mars.txt
 2019  cat mars.txt 
 2020  git status
 2021  git add mars.txt 
 2022  git status
 2023  git
 2024  git commit
 2024  git commit
 2025  git status
 2026  git log
 2027  git status
 2028  cat mars.txt
 2029  git log
 2030  nano mars.txt 
 2031  git status
 2032  git diff
 2033  cat mars.txt 
 2034  git commit
 2035  git add mars.txt 
 2036  git status
 2037  git commit 
 2038  git log
 2039  cd ..
 2040  mkdir iplant_workshop
 2041  cd iplant_workshop/
 2042  ls ~/Downloads/Sunday_scripts.zip 
 2043  mv ~/Downloads/Sunday_scripts.zip .
 2044  ls
 2045  git init
 2046  ls
 2047  ls -a
 2048  pwd
 2049  git status
 2050  unzip Sunday_scripts.zip 
 2051  ls
 2052  git status
 2053  git add Sunday_scripts.zip 
 2054  git status
 2055  ls
 2056  git commit -m "Initially add script zip file"
 2057  git remote add origin git@github.com:strootman/iplant_workshop.git
 2058  git push -u origin master
 2058  git push -u origin master
 2058  git push -u origin master
 2059  git fetch
 2060  git status
 2061  git log
 2062  git pull
 2063  git log
 2064  git pull
 2065  ls
 2066  nano setupProject.sh 
 2067  bash setupProject.sh 
 2068  ls
 2069  ls data/
 2070  nano cleanData.sh 
 2071  git status
 2072  git add *.sh
 2073  git status
 2074  git commit -m "Extracted zip file and added scripts"
 2075  git status
 2076  ls
 2077  git add -A
 2078  git status
 2079  git commit -m "Ran the setup projects script"
 2080  git log
 2081  git log --oneline 
 2082  git status
 2083  ls
 2084  bash cleanData.sh 
 2085  git status
 2086  git diff
 2087  git status
 2088  git diff data/clean/China.cc.txt
 2089  git add data/clean/China.cc.txt data/clean/Guinea.cc.txt 
 2090  git status
 2091  git diff
 2092  git diff data/clean/China.cc.txt
 2093  git diff --staged data/clean/China.cc.txt
 2094  git status
 2095  git reset HEAD data/clean/China.cc.txt
 2096  git status
 2097  git add -a
 2098  git add .
 2099  git add -am
 2100  git status
 2101  git commit -m "Ran cleanup script"
 2102  git status
 2103  ls
 2104  nano combine.sh 
 2105  git status
 2106  git diff
 2107  bash combine.sh 
 2108  git status
 2109  ls output/
 2110  cat output/combined_gapMinder.tsv 
 2111  git status
 2112  git add output/combined_gapMinder.tsv 
 2113  git status
 2114  git commit -m "Ran combine script to generate big tsv"
 2115  git push
 2116  git log 
 2117  git log --oneline 
 2118  vim ~/.bash_aliases 
 2119  cd 
 2120  cd git/swcarpentry/workshops/2015-02-21-iplant/workshop/02_Sunday/
 2121  ls
 2122  ls 01_Sunday_am/
 2123  ls 01_Sunday_am/git-intro/
 2124  ls -a 01_Sunday_am/git-intro/
 2125  git pull
 2125  git pull
 2000  ls
 2001  vim .bashrc 
 2002  source .bashrc'
 2003  source .bashrc